+/** Flag to indicate if the bootloader should be running, or should exit and allow the application code to run
+ * via a soft reset. When cleared, the bootloader will abort, the USB interface will shut down and the application
+ * started via a forced watchdog reset.
+ */
+bool RunBootloader = true;
+
+/** Magic lock for forced application start. If the HWBE fuse is programmed and BOOTRST is unprogrammed, the bootloader
+ * will start if the /HWB line of the AVR is held low and the system is reset. However, if the /HWB line is still held
+ * low when the application attempts to start via a watchdog reset, the bootloader will re-start. If set to the value
+ * \ref MAGIC_BOOT_KEY the special init function \ref Application_Jump_Check() will force the application to start.
+ */
+uint16_t MagicBootKey ATTR_NO_INIT;
+
+/** Indicates if the bootloader is allowed to exit immediately if \ref RunBootloader is \c false. During shutdown all
+ * pending commands must be processed before jumping to the user-application, thus this tracks the main program loop
+ * iterations since a SCSI command from the host was received.
+ */
+static uint8_t TicksSinceLastCommand = 0;
+
+
+/** Special startup routine to check if the bootloader was started via a watchdog reset, and if the magic application
+ * start key has been loaded into \ref MagicBootKey. If the bootloader started via the watchdog and the key is valid,
+ * this will force the user application to start via a software jump.
+ */
+void Application_Jump_Check(void)
+{
+ bool JumpToApplication = false;
+
+ #if (BOARD == BOARD_LEONARDO)
+ /* Enable pull-up on the IO13 pin so we can use it to select the mode */
+ PORTC |= (1 << 7);
+ Delay_MS(10);
+
+ /* If IO13 is not jumpered to ground, start the user application instead */
+ JumpToApplication |= ((PINC & (1 << 7)) != 0);
+
+ /* Disable pull-up after the check has completed */
+ PORTC &= ~(1 << 7);
+ #elif ((BOARD == BOARD_XPLAIN) || (BOARD == BOARD_XPLAIN_REV1))
+ /* Disable JTAG debugging */
+ JTAG_DISABLE();
+
+ /* Enable pull-up on the JTAG TCK pin so we can use it to select the mode */
+ PORTF |= (1 << 4);
+ Delay_MS(10);
+
+ /* If the TCK pin is not jumpered to ground, start the user application instead */
+ JumpToApplication |= ((PINF & (1 << 4)) != 0);
+
+ /* Re-enable JTAG debugging */
+ JTAG_ENABLE();
+ #endif
+
+ /* If the reset source was the bootloader and the key is correct, clear it and jump to the application */
+ if ((MCUSR & (1 << WDRF)) && (MagicBootKey == MAGIC_BOOT_KEY))
+ {
+ MagicBootKey = 0;
+ JumpToApplication = true;
+ }
+
+ if (JumpToApplication)
+ {
+ // cppcheck-suppress constStatement
+ ((void (*)(void))0x0000)();
+ }
+}